BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB038A11SP1|AL430478
(868 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1714 1694 0.0
>3x_Contig1714
Length = 18873
Score = 1694 bits (854), Expect = 0.0
Identities = 865/868 (99%), Gaps = 1/868 (0%)
Strand = Plus / Minus
Query: 1 gatcatgtnttcctatcgatgctttgaagactagaatgcaagcagtatcggaaattaagg 60
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18135 gatcatgt-ttcctatcgatgctttgaagactagaatgcaagcagtatcggaaattaagg 18077
Query: 61 ctgcggcgtcggcgtcggcatctggtggtgccggtgctgccagtggtggtgccggtgcgg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18076 ctgcggcgtcggcgtcggcatctggtggtgccggtgctgccagtggtggtgccggtgcgg 18017
Query: 121 gtacccttttacaacagatatcgagaatctcttctacagaggggtcccttgcgttgtgga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18016 gtacccttttacaacagatatcgagaatctcttctacagaggggtcccttgcgttgtgga 17957
Query: 181 gaggtgtgcagtctatggtgatgggtgcaggccctgctcatgcagtatattttgcaactt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17956 gaggtgtgcagtctatggtgatgggtgcaggccctgctcatgcagtatattttgcaactt 17897
Query: 241 atgaattttgtaaagaacagttgatcgacgctaaggatttcaatacccatcagccgttga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17896 atgaattttgtaaagaacagttgatcgacgctaaggatttcaatacccatcagccgttga 17837
Query: 301 aaactgccgtcagtggtgttgctgccactgtggccgcagatgcattaatgaaccccttcg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17836 aaactgccgtcagtggtgttgctgccactgtggccgcagatgcattaatgaaccccttcg 17777
Query: 361 atacaatcaaacagaggttgcaattgcaatccaagagtagtgactcttccatgtggagaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17776 atacaatcaaacagaggttgcaattgcaatccaagagtagtgactcttccatgtggagaa 17717
Query: 421 tggctttcaacatttataagaacgaaggtccaatggctttcttttacagttatccaacca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17716 tggctttcaacatttataagaacgaaggtccaatggctttcttttacagttatccaacca 17657
Query: 481 ctttggctatgaatatcccattcgcagctttgaacttcgtgatttacgaatccagtacta 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17656 ctttggctatgaatatcccattcgcagctttgaacttcgtgatttacgaatccagtacta 17597
Query: 541 agttcttcaacccaactaatgcatacaacccttggatccattgcttgtgtggtggtatcg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17596 agttcttcaacccaactaatgcatacaacccttggatccattgcttgtgtggtggtatcg 17537
Query: 601 ccggtgccacttgtgcagctgttaccacgcctttagattgcatcaagacagtgttacaga 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17536 ccggtgccacttgtgcagctgttaccacgcctttagattgcatcaagacagtgttacaga 17477
Query: 661 ttagagggagcgataccgtccatgtggaatcgttcaaaaccgcaaatactttcaagaaag 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17476 ttagagggagcgataccgtccatgtggaatcgttcaaaaccgcaaatactttcaagaaag 17417
Query: 721 ctgctcaagccatatggcaatcttacggttggaaaggtttctggagaggtttacaaccaa 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17416 ctgctcaagccatatggcaatcttacggttggaaaggtttctggagaggtttacaaccaa 17357
Query: 781 gagttatttctaatatccctgcaactgctatctcctggacctcttacgaatttgctaaac 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17356 gagttatttctaatatccctgcaactgctatctcctggacctcttacgaatttgctaaac 17297
Query: 841 atttattgttcaccaarcaagaaccctc 868
||||||||||||| || |||||||||||
Sbjct: 17296 atttattgttcacaaagcaagaaccctc 17269
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5067
Number of Sequences: 1807
Number of extensions: 5067
Number of successful extensions: 44
Number of sequences better than 1.0e-20: 1
length of query: 868
length of database: 10,358,551
effective HSP length: 16
effective length of query: 852
effective length of database: 10,329,639
effective search space: 8800852428
effective search space used: 8800852428
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)